YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIM21_NEUCR
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKMLTGTSA GVRLLLSPAV VRQQATITTA ASRALPPTAA SVILVSSRRQ YATTQESSKR  60
   61 RSVTPFNDDG HVPWTRLSTG EKAGRAVQQT FNFGLVILGV VLTGGIAYLL FTDVFSPESK 120
  121 TAYFNRAVDR IRADPRCVAL LSPGDPKKIA AHGEETHNKW RRARPIAATV EKDNRGVEHL 180
  181 KMHFHVEGPR GSGVVGLHLT KQPGHWEHEY QTFYVDVRGH QRIYLENKEA EVAAAKKGGN 240
  241 KEFKFLGVKW N

Type	Start	End	Confidence
Cytoplasmic	1	90	0.61
Transmembrane Helix	91	111	0.70
Non-Cytoplasmic	112	251	0.89