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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7483570
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKCDFCGKK VDLPFRCNYC GSLFCEDHRL PPKHNCPNIV QWGRKAPPPR THRKKTYSRR  60
   61 RTSRLKVRTE DNWVPVQVKK KKSGSAIKYL IAIVLLVAIV SAAYTYSRSK QLPDIFPFDV 120
  121 QSGTITFSEV PPSQTVPPSP AIKKCDDGTP YGSCSPTRPL FCDNGSLVKK ASLCGCPKKY 180
  181 IPKGDGCIYQ LTLGPEHRSL SYCNNGLKSS LPFTVYRGLK EYLSNLPRTF VCDPECPSDQ 240
  241 EIYQMIINQP DQVEFIQELI KLIKVIGQTK DDQARIAISI VQMIPYDYEK VFTLSTESWK 300
  301 YPYEALYDYK GVCQDKSLLL ALLLKELGFG VVLLVYEDEN HMAVGIKCPG RYANYIYQGS 360
  361 GYCFVETTTP SIITDMSGEY LGVGALKSKP KIYIVSDGDS LDSVGKEYQD AREWQRLNAI 420
  421 AEANNYILSH EDYEKWQDLV EKYCIEVKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle