YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2650410, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVVPILVL LAALLLLGCT QQAEQKEEKA QIKLVEPGYL TVGSDIAYPP FEFTDEKTGE  60
   61 YAGFDIDLMK EIAKRMGLEA KFVNTAWDGI IPGLLAHKYD VICSAMTITE ERAKQVDFSD 120
  121 PYFEAKQVII TRADETDIQD VEDLNGKVVA VQQGTTGDFA AQRLKDEKGI QLEIKRFEGT 180
  181 PEALMAVQKG DADAAIIDNF VAYIAAKENP GLYRIVESDE FAPEYYGIAV NKDNPALLEK 240
  241 INEVLKEIKE DGTYDKIYNK WFGE

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	264	0.99