YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32420833, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSPQITNL IIILGMMQVA KKIPFEDPNV LNLCRALYAL SNVIILCIHL YIMNTINKKK  60
   61 DLTTLKYVEP APMGSTEEGK LVTTTIHAYD LAQSKQLLRS QMMGVFMMGV MHLYFKYTNP 120
  121 LLIQSIIPLK GAFESNLAKI HIFGQPASGD LKRPFKQSAG LMAGLQGGAA QSDKKAVEAA 180
  181 ERAGRGGAKE E

Type	Start	End	Confidence
Non-Cytoplasmic	1	33	0.52
Transmembrane Helix	34	53	0.55
Cytoplasmic	54	96	0.59
Transmembrane Helix	97	115	0.49
Non-Cytoplasmic	116	191	0.74