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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85113241
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.16
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLNTPPRHD ASASNSGPSA GQPPQNQPSR RRKNHRAGKK KKKNRRTSFG VTSEDMAQER  60
   61 MNDKALAEAR NGFYSQPGNN FSNTSIDSEA LLDHREQQPF LRPRRPSMLV SQSSHLTTPQ 120
  121 VASRLKTVVA SSNNSEDEHE GAPLLSSSVF QRSEGFAGYG SNDTARRDSV ASRLESSRDS 180
  181 SKRRRATSLG ATGTEGYNVN YPPSVPGTPP MGATDRDLSM SFGDIMMRDD VNSMPNSPGR 240
  241 RTLNEESDLV GSLERRHTIA LQAEEDVCFP QDGLSEIADE DLRTRDPTAY RMKRRRRGKW 300
  301 PDLAILEEWS RYEKEGRSEE RHAKKITEPQ LINGRLRPVH RGWYRAQEDA PYRFTYFNEE 360
  361 FQSTIHSQTI SELVPPGGSF RQLFIPDPPL LSDSSDDEDD EEDQRHVGLD EVLGGQNGDP 420
  421 RIPSRQPSLT TTTQGYFDAR RDRGSNAGTT VTDSKRTSGE HTPTDTKSPE RSKSPPTEKT 480
  481 SKPPKYGDRP VWWLDIYSPT EQEMKVISKA FGIHPLTAED IMMQEAREKV ELFRHYYFVN 540
  541 YRSFDQDSAS ENFLEPVNMY VVVFREGVLS FHFSQTPHPA NVRRRIRQLR DYLILSSDWI 600
  601 SYAIIDDITD VFGPLIHNIE DEVDDIDEAI LLLHSEDDPN FPTDNLKEKS EAGDATSAES 660
  661 GRDMLRRVGD CRKKVMSLYR LLGNKADVIK SFAKRCNEHW EVAPRSEIGL YLGDIQDHIV 720
  721 TMTSNLSHYE KILARSHANY LAQINIRMNE RQEQTADVLG RLTVLGTIVL PMNIVTGLWG 780
  781 MNVWVPGQGN EGDLKWFTAI TAGLLLFGFG CYLIAKRVYK IV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle