YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85112000
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHSGHDHST HMDHSGHGDM HSGHPGMGEG APRCSMNMLF TWNTENLCIV FRQWHIHSTF  60
   61 SLVVSLLAIV ALAAGYEALR EGIRQYEAWT NKRVETTPHP REQYRDDDDD DDVEQQLEDE 120
  121 ERLAETTMPW LLGQNVAAVT KRAHAIKSVL YGIQNFYAFM IMLIFMTYNG WVMLACSLGA 180
  181 ALGYFVFGSR TTATKETACH

Type	Start	End	Confidence
Cytoplasmic	1	55	0.57
Transmembrane Helix	56	79	0.81
Non-Cytoplasmic	80	155	0.52
Transmembrane Helix	156	188	0.75
Cytoplasmic	189	200	0.74