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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32420433, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARHIGLDPN NPQWHRSSTS LSRHLLSALL LTTTITTGVH AYTPLSTCTL QHLTFGPSSD  60
   61 FDIHNGFGSS SLLAPILIPR VPGTEGSRLV QQHFVDFFSS QLPDWTLEWQ NSTSTTPATG 120
  121 SQLIPFANLI LRRDPPWAKA GNVKRLTLAA HYDSLFRPEG FIGAVDSAAP CAILMAVARA 180
  181 VDGALGRRWE GVMAAKEKRE GGGERDAGDG LEDEEGGEEE EEKGVQIVLF DGEEAWERWT 240
  241 NTDSTYGSRA LAEAWQSSPY EASSTHSNRL ESISLLVLLD LLGAGNPRIP SYFWDTHGAY 300
  301 KDLAKIETRL RKLGVLETAP ASPFLPDSEK PYNRFTRGYI QDDHVPFMER GVKVLHIIPT 360
  361 PFPPVWHTMD DDGEHLDLPT VRDWAKIMTV FVAEWMDLDG VLSQESCAAQ KEKGSGSMEK 420
  421 DELYDCTRRV LKLRRKYDYI ECAASSWSFD DASISVAAKK GSDAIKEKFS QKAPLTKPVG 480
  481 LGSTDTVKII LTAKEDGKAK RPHQAFVTIK EQETGLEAPF PLTVKDTGKA VVQISQKDLP 540
  541 VQFLLSPKPL KASVVIGSFG EARAINTPVF DIEIQTDPNT PLPKYEAPIR YGKKPEIHHI 600
  601 FRPDPQSPPK VISLFFALAV AATVPALFIS WLLLGANLNH LSKALGAAPL SHITFFGSIV 660
  661 AMEGVFFLYY TSWNLFQILP VAGVVGIVTV LSGTKALGEV QSRRLAGER

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle