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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28927124, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASSTVARR ALVVNPFLGA GVALPRQGLL AASTLLARNS RHIMLNNQTS ALVFPVRPIT  60
   61 TSGTSTHGSG PPAGPPPGFN AEEAKKPLPR EAATLPVKSK TIAGEVQEVT KKTTEALAGT 120
  121 EASQSQLAEQ KQAGAEKSEG KKEEPKLTLK QKIKKEAQHY WDGTKLLAAE VRISSRLAIK 180
  181 MAAGYELTRR ENRQLRRTVQ DLGRLVPFSM FVIVPFAELL LPVALKLFPN MLPSTYEEQK 240
  241 SKDKKASTLR ATRKEVSDFL RKTMKETGLP LTQVTAQKEE FSNFFRKVRS TGEKPTAQDV 300
  301 IKVCKIFKDD LTLDNLSRPQ LVSMCRYLNL NTFGTDMMLR YQLRHRMRQI KRDDRAISYE 360
  361 GIETLSVAEL QVACASRGIK SYGVSPARLR EDLQTWLDLR LREGVPSTLL VLSNAYMYGQ 420
  421 TDGEVSSQIE ALTGVLSSIP EELFHEIELE VHNAEGAATN KQRLEVLKEQ QELIDEELQQ 480
  481 DQENQKTGFA TPRDTEDIDE DHERHIQAKA DGIEKAQVSE AVDAEQEALT AARVEQAGEQ 540
  541 KSEKTTEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle