YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32420371, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKKDMRRA DLIIPYQEPA AKTDAPEFQS TLSSTLPMAA IFMRNRYIGW AAVVFAVQSW  60
   61 LGESEDTKKS TSTPGYFSVG MSLMSLAVTY LPLFLPPPPG MQQGSATDAA PPVPA

Type	Start	End	Confidence
Cytoplasmic	1	72	0.56
Transmembrane Helix	73	95	0.85
Non-Cytoplasmic	96	115	0.61