YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85111285
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICRTCLRRA SGFARPAAAA ATRPMVAASS RAAFSTTFSV CTPPAATPAA AAPATSTAEA  60
   61 GLAPVPGAAT TEQAKAAISS CPAGTKLNGL NYFKNKADPV ALPDEEYPEW LWRCLEVQKK 120
  121 TDDAADADAG DEFSKSKKQR RLAMKRARAQ EAKILASGDL EALAPKIPLQ KQSVNLPGAV 180
  181 NGGVQDAVLA DEKREELRKA MRKERKAKIK ESNYLKAM

Type	Start	End	Confidence
Signal Peptide	1	51	0.91
N-region	1	42
H-region	43	48
C-region	49	51
Cleavage Site	51	52
Non-Cytoplasmic	52	218	0.99