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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85111914
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSLRRTSG ASRPTSSRSI SAPTPSLTAA TGLPFPALPA SPVKQPSPTR QSQASSDGRK  60
   61 RKREATGFSQ AGDGLLKASV VLRPRPSTLT DKPRILSPLM LLPREHLPLS ALDLLQPQGD 120
  121 FPPSRFYESR IKILDLEGRL GSNILLARSE ANRMLYAIER ESDGLYTLCK LGSWVDVDIL 180
  181 AQAATVVSSQ RMKSCKPSQL EVVAPGPLIT PQMYKETKRR KLAIEEIQSS LTRKRSNTTT 240
  241 TEQESLSHLP TPTSGSPESK SCESQCIAEP AEVPTVSNKP DLPATLPHPA EDVLSQPTAE 300
  301 GIFQNIRMQY FEALYHSKGS LAYFAKGPLS RARAAFHLDC DSNLEMSHLI DFLRGFVMTT 360
  361 ALIDKKYRET LPEIIGKMKT IVEDSEQGHA RSKPRKKRVK RQKLGKDGLY PSEEEHIERW 420
  421 WVTHKPSTTQ EDEKMVAATE AKHHISALRR RETQLQMIII LEILALEPLN RPVVATEDNE 480
  481 LPGLETQETI GGTKSERNRK KNKTPNLPLL LDMHADRLCI WQSTTLDEVK ALTESQPSAE 540
  541 EQEAPAENNN SDPLRDFCVD IIVPFFSARL PELCDFINRK LGGPVIQAPK EKAKTVAATK 600
  601 PKPGAPGKRV AATKKENERS LQRVLSNERM RRSVSRGPSG TIALLRSASA TAIPGLKREG 660
  661 SEPLLGMIPK TEAVAVKEKN VSIFSRSAGP SANSEDTKAK KKARLEAELK EAISALKKPN 720
  721 RALAGKEIVE EAERRTAQPK SKLNKKQPRA AGVQIKATPA NNRFKDVFAT ESQPLHLNHL 780
  781 FEEDGPPIPS SASVVPASTL PRKFTNVFAT STSPNIGAHP SSEGGNETAQ LPPRKQMQET 840
  841 PLRKKSVPHI SLPQIDEEVE EATPVPPKNM EELHVQATPM RKQRFTQQKL PVPRPEGHLQ 900
  901 VQATTPQRKR AIQGTPMRKK SLQSLPQIVE EDDPLTHSIP SSSPIFAKRL TIASPFNRAA 960
  961 KQQQQQHLVP PTPLGNRSGN EGAAMTTADF PPSSPGFAFF ETPLNNAKTK TAMLTTAAGG1020
 1021 VVVDDTPIKS RLPSAFTSMT KEARGSENNR PFGSSGGGGV GGVTKIKKEK DNSPVSIYQR1080
 1081 LGWDDTDDDL A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle