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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32419895, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELDTLDLV VLAAILLGTV AYFTKGKLWG VTKDPYASSL ANASGAKAGK TRNIVEKMEE  60
   61 QGKNCIIFYG SQTGTAEDYA SRLAKEGKSR FGLETMVADL EEYDFDNLDT IPDDKVVFFV 120
  121 LATYGEGEPT DNAVDFYEFI TNEDVNFTEG NEPALGNLNY VTFGLGNNTY EHYNSMVRNV 180
  181 DKALQKLGAH RIGDAGEGDD GAGTMEEDFL AWKEPMWKAL AERMGLEERE AVYEPVFSII 240
  241 EREGLTKESP EVYLGEPNKM HLDGTAKGPF NAHNPYIAPI AQSYELFSVK DRNCLHMDID 300
  301 ISASNLNYQT GDHIAVWPTN PGEEVDRFMN VLGLSEKRHT VVSVKALEPT AKVPFPTPTT 360
  361 YDAIVRYHME ICAPVSRQFL AQLAAFAPDA EARAEMTKLG AEKDYFYEKI SLHHLNIARV 420
  421 LDIVGKGQKW TNIPFSAFIE GITKLQPRYY SISSSSLEQP KTISITAVVE NTQLPGRDDP 480
  481 FRGVATNYLL ALKQKQNGEP EPCPFGLSYE LTGPRNKYDG IHVPVHVRHS NFKLPSDPSK 540
  541 PIICIGPGTG VAPMRGFIRE RVQQAKNGEK VGKTLLFFGC RKSTEDFMYK NEWEEAKEIL 600
  601 GDNFELITAF SREGPKKVYV QHRLKERAEE INQLLEQKAY FYVCGDAANM AREVNTVLSQ 660
  661 IISEQRGIPE AKAEEIVKNM RSSNQYQEDV WS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle