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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85118218
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIILAEQLS LDSVEYDPIA HLNLLFSHPS TVSSVGRVSS TLQRHKDELT KSIDSLETAQ  60
   61 AYGPDSSLER MQSAQAELAS LFQRIESVRN RALQTERDIT TMTADIKRLD GTKRNLTHSM 120
  121 TALKRLQMLT TAYDQLRGLA KTRQYRECAG LLQAVLQLMR HFNSYRSIEQ IAVLSRNVSE 180
  181 LQRELLEQVC EDFELAFAKG EVAARRGMLA EACLVMDALG EQAKARLITW YVNTELREYR 240
  241 SVFRGNDEAG NLDNIGRRYA WFRRMLQTHE GEHAAIFPAH WRINETLSMA FCDGTREDFK 300
  301 GILEKSMRRT DGGTNKIDVN LLLNCLQETM DFEQSLERRF SSEVRASIDT LSSADDRVSN 360
  361 FNGSISVAFE PYLSLWVESQ DKTLAGMIPK YKSQPLIPPD EEFSPQAVIP SAIELFHFYK 420
  421 LTLSQCAKLS TGERLLDLAK TLAKYLDEYA QQVLFTLLQR GGPQGPPVQD IILVLNTADF 480
  481 WHTNANQLED NIKKRIDPEM ASKVDLSTQA DTFMGVASAA VLALVHKVEV DCEPAWREMK 540
  541 NTNWSRMESV SDHSSYVSEL LKNVNGKAAK ILPLVVKPQY ARAFCDHLVE NIANSYISNV 600
  601 VQCRPVCEVG AEQMLLDKYI LTKAFENLLA FHNTNHPPPG TPSDPNAPPP PPPPASYIKR 660
  661 VNQSMTKIDP LLKTLQVRPS PPEGLVQAYL NLIGDCSDAN FKRILELKGV PKKDHSHLLE 720
  721 LFSVHREGAG VGRTLVQNSP LLTPLFASMG SGISIGGGIA PGFAATGHHA SQGSGSVTSR 780
  781 FDAATSLGEK LLSAARDMST MEREGVTSGG GATTTASDKA TINENLKNIG NFFRRDIGAL 840
  841 GARFGKRDIT PTGASHD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle