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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38566953, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKKNKSKG QRGVAAALAT FQGDSMAIDS EVTSLQNSTA PTDGELTSTT ISAGLKRPCP  60
   61 EDDHEDGGGW QTIENGRPVK KLKKIPGQES KRYPGIHFST QARLFSKINV SSLRDLILYI 120
  121 FADGPAPQWV SVKHRPEFRK IVAIMVPGLD EAMFKNGLDF SAYTGPTLDQ AISGGGAPDP 180
  181 DEYYPRELKK ELLPEVLQPF ADMFPHLWPV KAPGDDKYGK LHSPMPAMLT APLPKSKGTG 240
  241 IQPVSEPHGW KNQRTRITEF LATNEELMEH GFPVHPAMLN PGEKKDKFKD PEGWVHTRVE 300
  301 NLEDGKVPEG EVQQGSVTAG REVYALDCEM CMTGEAEYSL TRISLVSWDG SVVLDELVKP 360
  361 DKPIIDYVTR FSGITKEMID PINTTLKDIQ ARLLDILGPR SILLGHSLDS DLKALKLAHP 420
  421 FIVDTSLLFP HPRGLPLKQS LKYLAQKFLN REVQKGGGTN AGHDSIEDAK TCLDLVKRKC 480
  481 EKGKAWGAGE SQGENLFKRL ARAGTAYRST AGPEATGGAP VGKSSAAVDW GDVSRSAGNA 540
  541 ATVTISCKSD AEVEAGILRA VKGDPDGLEV PGGGVDFVWA RMRELEALRG WWNRNKLVPE 600
  601 DAGGPPALTD GDKKEEEEEQ EDAASPLETC LKTLGERLKR IYDNLPPCTA FIVYTGTGDP 660
  661 REMSRLQAMQ AQFKKEYNTP GSKWDQLSVQ WTDREDQALR RALKVARSGI GFIGVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle