YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BTN1_NEUCR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	8	0.90
Transmembrane Helix	9	29	0.85
Non-Cytoplasmic	30	39	0.64
Transmembrane Helix	40	57	0.68
Cytoplasmic	58	65	0.59
Transmembrane Helix	66	87	0.90
Non-Cytoplasmic	88	93	0.61
Transmembrane Helix	94	117	0.86
Cytoplasmic	118	125	0.59
Transmembrane Helix	126	147	0.92
Non-Cytoplasmic	148	157	0.59
Transmembrane Helix	158	178	0.93
Cytoplasmic	179	256	0.79
Transmembrane Helix	257	275	0.94
Non-Cytoplasmic	276	297	0.87
Transmembrane Helix	298	318	0.82
Cytoplasmic	319	329	0.57
Transmembrane Helix	330	364	0.74
Non-Cytoplasmic	365	393	0.49
Transmembrane Helix	394	417	0.71
Cytoplasmic	418	432	0.58

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRSPSSSGL LPLPGLINNV LYVIILSAAQ DLVGNGIPKG VVLLADVMPS FLTKLVAPYF  60
   61 IHRIPYATRI FIFVTLSSAG MLLIAFTPPS RSVAVKLIGV VLSSISSGGG ELSFLGLTHY 120
  121 YGHMSLAAWG SGTGGAGLIG SLLYVMLTDW IGLSVKTSLL ASAFLPIIML VSFFLILPHG 180
  181 PLRASARKTY EPIANRDSFQ EESEGAENNF DDIPTSTASS SLLAPGPAVA ATAYSSHPTE 240
  241 DARKDSLAAK IQRSKSLFFP YMLPLLLVYI AEYTINQGVS PTLLFPLESS PFAEFRSFYP 300
  301 FYGFLYQVGV FISRSSIAFI RIHHLYLPSL LQVANLVLLT LHALLNFIPS VYIVFVIIFW 360
  361 EGLLGGCVYV NTFAEIMEHV PAEDREFSLG ATSVSDSGGI CVASFLSMAM EIWLCNWQVD 420
  421 HGRDWCRRIK AG