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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50903547, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADYGSNNDR GYNLLLRVEE TGTSTANNTS TVRVQLWLRN GQTTFGMYNC SASVSIDGQT  60
   61 LSWSGRPDMY SMNSSLHLID KTITIAHNSN GQKTIGFSAT FSGSGGWSPG TLNTGYQSLR 120
  121 LRDIPRSSTA SVSGNMMGSP ITISITRASG DFTHKVTWQF GSLSGVVATG ATTSCSWTPE 180
  181 VAKLAPQIPN ATSGIGTILV QTIYGGKVIG ESRIQVTLQL PSSVVPSLSS ISLSDLNTIA 240
  241 QNAITGNTFV SLESNPKVTF NGATGIYGST IPASGYRAEV FKFEGNSWIQ LQNVATAQNG 300
  301 GVGGINHVGR AKISAFVTDS RGRQSPRKEV EISLLEYFKP ILSFTSVRVG TTMNQLNVIR 360
  361 KVKIAPLIVG NSQKNRATMT WDILDLSTGT KTTNVGGAAN WSTTTEHTKE NFQATLNGTY 420
  421 DQTKSYTIIG HLRDLFYETD FEFTVGPEKV VYGLSPTGMG IGKAWTRGVL DVDGSQPSYF 480
  481 DGDIIMRNKK LIDIFYPIGT IYESTSSESP STFMGGKWER FGNGRVLVGV SETESEFNTV 540
  541 SKTGGSKTHT LTINEMPVHS HPQYVSANSG NQATRRDYSS DGSSSLYPQG NNTGNLEEDR 600
  601 LITIYNLILQ FIGGDVPLRG ETMKQEVLTN KLVFSGIGGV IGSIFGEIDG FLYGLLIFML 660
  661 IDYVTGIMAA IVEKNLSSSI GKKGIFKKAM IICLVAVAHM IDLHVLKQGG AVRTAVIFFY 720
  721 FSNEGLSILE NATRIGLPVP NRIKQVLRQL NEDKEDENDK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle