YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COQ4_NEUCR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVTALRRSA ALVARASSQN AIRPAVCAAI SSTSPTPPTQ IQTQQTRQFS ALNRPPPNYP  60
   61 GHVPLTRLER FGLFVGSGLI SLADPLRGDL IASFAEATAT PYFIYRLRDA MLSHPTGRRI 120
  121 LRQRPRITSQ SLNIPYLRSL PPNTVGRTYI DWLDREGVSP DTRSAVRYID DEECAYVMQR 180
  181 YRECHDFYHA LTGLPIVREG EVALKAFEFA NTLLPMTGFS VFAAFTMKKS EQKRFRKIYF 240
  241 PWAVKNGLRA KEVINVFWEE ELERDVNDLR RELGVEPPPD LREIRKRERE EKRRRKEMER 300
  301 MLSGRGTEDV IQKAEKEAEV VAERVKEMRN EVVEKVGEVV GSSAMRG

Type	Start	End	Confidence
Signal Peptide	1	28	0.54
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	347	0.92