YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85113362
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVPFLGRLD VTEYVALIGS FFLVGFEALI RVLTLALPNT LITLFYRLSR RLFNRWTTPA  60
   61 QKRAEERRQP VSEAVRNASD FVDLCALFGY TAEEHVVQTK DGYLLGLHRL AYKKGEEDTK 120
  121 VNRGPNSIKK RVVYLHHGLL MNSEVWVCLT DEQRCLPFVL VERGFDVWFG NNRGNKYSKK 180
  181 SVHCSPMSQR FWNFSIDEFA FHDIPDSISY ILETTGQPSL SYIGFSQGTA QAFASLSIHP 240
  241 KLNDQVNVFI ALAPAMSPAG LSNGIVDALV KASPQVLFLL FGRRSILSSA TMWQSILYPP 300
  301 IFAKLIDMGL SFLFNWKTQN ISTSQKLAAY PHLYSFTSTK SVVHWFQIIR TKSFQMFDDD 360
  361 VQPPLMLSTS SKYTKVAKYP TRNIKTPIVL VYGGIDSLVD IKVMLRELPT QTVATEIPHY 420
  421 EHLDFLWARD VDAQVFQHVF DALESFTGAE HTKEEYERYR SARHVSLSAS NSLRRFKPNK 480
  481 NGDNMAVDSD VSTAVAGSVH DGEEQFIDAD ERQERLGQIE APHQARESPL TTSVGSLSST 540
  541 SGSKLGGNIL RRPNSRPTSP MYPGSLDTRF ENGSRAESPS DRSPDSEYVG ALPSVTPPKR 600
  601 TGTGASQMSL NSLRAGKGIS LGASESP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle