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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50841750, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNASRIFKG PLIWILLCIG LIIVFLQFAG SGNGYKDIPT SEAVSIINSS KKLDSVTLTD  60
   61 GDQVIKITEN ENKKYRSYWV GNQSDQLVDR LNDRVKAKTL KSWQGENPGQ SIWKALLINF 120
  121 LPFVIILLFF LWAMNAAQGM GGRGGVMGFG KSKAKVGSKD TPKSTFADVA GCQEAIDELQ 180
  181 EIREFLAEPA KFQRVGAKIP KGVLLYGPPG TGKTLLARAV AGEAGVPFFS ISGSDFVEMF 240
  241 VGVGASRVRD LFEQAKEAAP AIIFIDEIDA VGRHRGAGMG GGHDEREQTL NQLLVEMDGF 300
  301 DVHGGVILIA ATNRPDVLDP ALLRPGRFDR QIAVEAPDLD GRLKILKVHA HGKPMADDVD 360
  361 LASIARRTPG MTGADLANVL NEAALLTARA NLPVIGNSEL DEAIDRVIAG PQKKTRLMNE 420
  421 HERLVTAYHE GGHALVAAAM PGTDPVQKIT ILPRGRALGY TMVMPDSDKY SQTRSELLDS 480
  481 MAYMMGGRAA EELIFHDPST GASNDIEKAT KVARALVTQY GLSARVGTVQ LGSGDTEPFL 540
  541 GMTAGQQRDY SDETAKIIDD EVRELLENAH QEAFDCLDAN REVLDELVRQ LFARETLSKA 600
  601 EVADIFKPLK RWPERGAFTG SDKRVPSSIP PVKPPQIAGV DEDAPEVGAP RRGVIAPPTP 660
  661 EPGGDLPGDN PGEWEPPSDW QPPSVGGGKS PEPPSPTHPG EGPQPPSNGN PWGPPRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle