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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16945405, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAHGTEASL LCARLIAALL MTADVIAGYD LDLSSIDSLK HAARFMAEDM MSFYSGNQPG  60
   61 GIPGLLPQPY YWWEAGALMG SLIDYWYYTG DTQWNDLIQQ GLLFQAGPNS DYMPPNQTMT 120
  121 EGNDDQGFWG MTAMSAAESK FQDPPSDKPQ WLALAQAVFN TQAARWDTQK CGGGLRWQIF 180
  181 AWNQGYDYKN SISQACFFNI AARLARYTGN QSYADWADKT WDWMISSKFM DTQTYYIYDG 240
  241 AHTSNCSEIT PYQWTYNSGA FLLGAAAMYN YTTGNTKEVW RSRVDGLING LGVFFTGPQR 300
  301 NIMTEVACEP VNLCDLDQQS FKAYLSRAMA ATTKWAPWTY HRIKPLLKST AIAATSTCIG 360
  361 GSNGRMCGLK WTEHGKWDGT TGVGQQMAAM ELVLANMIEQ VAAPVTNHTG GTSAGNPGAG 420
  421 GGDVGKTNPF SIAVPYSPLS TADRVGAWII TAVIILGLVC GCVMQVLDEK SNLKTWQRLS 480
  481 TLHPDVFYAC GKHWRPGHGK TDRDGHGIEV EGHYDCNRPR FDIDDTCAFQ GECYDGDCGH 540
  541 IADSKEKDTV IEIHKEYADH RHSWHGVPPP PPPSQSSARY SSTLCAGSKS GSSGSGFGGK 600
  601 RMPPANKSII SNRLNHLNHR HSVLQKLQTQ QHQHQQQLLH ENSSHMHVQV PHTPLRHDDH 660
  661 HNRCFHSNSD KSPHSAWRSR HNHPSTQPSY YWDLDNTNGI DPARRVSQLS GISALPGGVS 720
  721 GLVPDSATGS TPNPKRQPDH SRSDETTGNS VPAEFRARDS HDHRREEQGE GVIVSNGIIN 780
  781 GNAALGDRIK NWRLADKERR EARNNRGGGN QFAWDSSESL YWGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle