YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85112049
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWTVFLLIY LFGGLTFLPL LVACALLHAH LTFPYRPDAV QHHDPEADDL IQPGDDLDAL  60
   61 KAEQKKDGKP RVTHHDDGVA SGYFAVCREY TPMGINAKPI ERSTPVGSTT VAAPSPSVYQ 120
  121 TMYRSIFDRK STGPSPIDHK NGPSQRPKKA GNVFYVVLRH GHLMLFDDDE QLEVRHVVAL 180
  181 AHHEVSIYSG EEVTPEGELY IKRNAIRLSR KTDGLEIGPD SQVSKPFYLF SENCSAKEDF 240
  241 YFALLRNQEQ QALDTESDIP SPIQFEVKNI INLVQRLHSS EEHMQTRWLN AMIGRVFLGI 300
  301 YKTKDIENAI REKLTKKISR VKRPAFLSNI AIKGIDTGES APFITNPRLR DLTVEGECCI 360
  361 EADAPKMEMT IEPIVSSRQI TYTVILRQIE KQIKEVMAET LVLPFWDDMP FFNTEHKKWR 420
  421 GGIFHDDTVV STMDLETAAA QEGDLDEVER LEGTQDVHEP DLPHVEKSHS MPTLDKKPSI 480
  481 SLFGRMTTKA KGDPVYSAST TSLSTNNQNE LKTDTRSETC IPPPIRVVSI THPPTPTVST 540
  541 DAINADVFKP SSSPPDESLA ASAMATLSVQ AHSPARPQPP HSPLRPSVIP KLSDQSSGSS 600
  601 SSEAVDAEKD LQDFDKKNQA RRNTATSAGS QEESRTRSPA SSIRGSVKSQ TGTIKGIFAR 660
  661 RDTVSSTTGA PTPNHPDSAK KTALAAAFVT NAAASAKRWG LNAFQRHSNN DGTPGRSASF 720
  721 TDDHPSVLDL NQPMGRGQPL PPPGTPLPMP DRRLKATSIS IPRRKPIPPP DQSLQQRKLS 780
  781 TPEDHDHKPE RRPVPPPPLP KRRQYRAEQQ LDDDGNTVNM LVVAAPAESE PTTPMSEAHE 840
  841 TSPIKPSSDT VKSKNQSGIS SSATEGPVGS KSPPKPLTPS IRNTQTTGQE NHEDVKALSL 900
  901 EVSAPNNDDD EFSAWMDDAG PVEDTDAAPA PTVNGSVGER ASP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle