YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ISN1_NEUCR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLPPSCWM FLPARLAEST EWIKALLAVP FVLYSQPHGV LEDPDRSVDT LSQTREEAHR  60
   61 RYSEIFRDIE AMIDDHIAHQ NDAENPFPSK LKLLVPSIGP FFTRLPLEAA FKFQDNKRYI 120
  121 SSRRFVSPSF NDIRLILNSA QIMAVTTYGT LQLATFDGDV TLYDDGQSLE PTSPVIPRLL 180
  181 DLLRKNVKIG IVTAAGYTTA DRYYSRLHGL LDAMANSADL TPSQKQSLVV MGGEANYLFE 240
  241 FDSSSPHLLA PVPRQHWLTP EMAAWNEQDI AQLLDVAEAA LRDCIKTLNL PATLMRKDRA 300
  301 VGIIPVSPEI RIPRESLEET VLLVQKILEL STVGRSRRVP FCAFNGGRDV FVDIGDKSWG 360
  361 VTVCQRWFSQ KEGPHGVIKG ENTLHVGDQF LSAGANDFRA RSVGTTAWIA SPVETVELLD 420
  421 ELAELMGKKM S

Type	Start	End	Confidence
Signal Peptide	1	17	0.73
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	431	0.99