YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32417212, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRIPNAPS SLLLQSSACS GSSSRCTASR LPTWASSCSS SSPQSSQPTT HQQQCSSFST  60
   61 TAPAHVQSVR RQKMFSWLDK KGSAYKEHTR QGPNLLGGQG KDGLAVPFPN NPYFKSQPVL 120
  121 SEGSREIIYQ DVMEKGLPIK AVSAKYNVDV RRVAAVIRLK EIEKRWIKEY KPLARPYARA 180
  181 VMKMLPQTVL GGPDQKPHES INDVHVHSYT TQQLFVPVSE SREFTREDAA KAFGDHILPV 240
  241 DKKLRVPELI EFQKDLLKEV PLQEANRKFL NATAASEAKI AEREAKRRQA VEDAITRVKT 300
  301 DRFEFRFQEF NAENVGHDGR DRNAVGWRYG VPFPDRKRSQ IKIPTKVE

Type	Start	End	Confidence
Signal Peptide	1	28	0.93
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	348	0.99