YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85118710
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTSSPTYT ISKTLNTNYP LIDNDPHFRR VIGYARPSDY VHGTVAGAAG PGLLYLMEKM  60
   61 APSGVGKGGF PKAMRLATAV GFFGGFLYFY QRSILRFYGM SENAREVQMD MREMVDKVKA 120
  121 GQPLYGVSTL PVDVQGMAAR QSRYSALFFA VLPWFNFVNH NQHGVDTAKY YQQAERELEA 180
  181 ERLGKGSSST ERKLTTIPYP DLYVILQEVR

Type	Start	End	Confidence
Cytoplasmic	1	37	0.83
Transmembrane Helix	38	57	0.73
Non-Cytoplasmic	58	72	0.71
Transmembrane Helix	73	90	0.90
Cytoplasmic	91	210	0.72