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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49613598, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSQVDLILS LLQQMCVYLV IAYLLSKTPL FIPLMQVTIR LPHKLVCYLV FSVFCIMGTY  60
   61 FGLHIDDSIA NTRATGAVLG GMLGGPSVGF LVGLTGGLHR YSMGGMTALA CMLSTIAEGL 120
  121 LGGLLHRYLA RRNRIDLLFK PLVVGLTALV AEILQMAIIL LVARPFDNAA ELVRDIALPM 180
  181 MITNTIGSAM FMRILLDRRA IFEKYTSAFS AKALQIAARA EGALRQGFNP QNSMRVARIL 240
  241 YEELGVGAVA ITDRDKLLAF IGLGDDHHNV GAPITSSHTR RAIDNNQVVY ADGNEVSYTC 300
  301 SVSSHCKLGS TLVIPLRGED QRVVGTIKLY EPKNKLFSSI NRTLGEGIAH LLSAQILTGR 360
  361 FEQQKQLLAQ SEIKLLHAQV NPHFLFNALN TLSAVIRRNP DHARQLVLSL STFFRKNLKR 420
  421 SNDEVSLNDE LEHVNAYLEI EKARFADHLT VEISLPESLR EARLPAFSLQ PIVENAIKHG 480
  481 TSQMIEHGHI HISGRLHANT LELSVEDNAG TYQPRSGGDG LGMNLVDRRI KARYGNRYGI 540
  541 TVVSETDKFT RVEVRVPLIS ARKALEKLDS VA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle