YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50123009, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPFLIAPSI LSADFARLGE DTTNVLAAGA DVVHFDVMDN HYVPNLTIGP LVLKSLRDYG  60
   61 ITAPIDVHLM VKPVDRIIPD FANAGASFIT FHPEATDHLD RSLQLIKDHG CKAGLVFNPA 120
  121 TPLSYLDYVM DKLDIILLMS VNPGFGGQSF IPSTLDKLRQ VRRLIDDSGY DIRLEVDGGV 180
  181 KVENIGAIAE AGADMFVAGS AIFGHPDYRA VIDQMRNEIS RTKHG

Type	Start	End	Confidence
Signal Peptide	1	16	0.73
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	225	0.99