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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49613431, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRKTRLALV VGCFTSGFTV SALAQDTPSS PSQGDTLVVT SQMQRGATKL ETPDIETPQA  60
   61 VSIITRDQIQ EQGATSVRQA VGYTPGVFNN QIGASNRFDY MVLRGFSDGS LDNVYLDGLK 120
  121 MMGDTNSHSS LVIDPWFLDS IEVVRGPASV LYGRSSPGGI VALNSRQPSF ERSGQIKLFA 180
  181 GNNAQRGAAF DVTGPLDDDE RFAFRLGGIV READTQFKKT KEERYAIAPS LLWRISDKTR 240
  241 LELMAYLQRD PEGGSHSGLP YEGTVVAHNG RKISNTFYEG EENYEKYDRK QNMVGYNFEH 300
  301 GFDSGWAVRQ KLRYLRTKVH LDQVYAYGWT QPSADTLTRY YSGSRESLSA LTLDNQLDGS 360
  361 VDTGAVNHRL LVGIDYQQRH NDVDWPSGSF PAIDAFSPVY GSGPTAMSGT LEKHKLQQTG 420
  421 IYVQDQMSWE RWRLTLGGRH DQVKVTHIDQ TKGTRSELDK NNFSSRAALL YLFDNGFAPY 480
  481 VSYSTAFTPT SFADDNGNVL DPMKGKQWEA GMKYQPEGSQ DQYSLSVFRI NQKNVATKVQ 540
  541 PNDPYRSIGE IESEGVELEA VSHITDNLRL QAAYTYTDIR YKKSSAAEQG KRAVYAPRNQ 600
  601 ASAWASYDVK SGPLDGLTIG SGVRYVNGVT SDRANTHTLP SYTLVDMAVG YDLSKVGLKG 660
  661 LSAQLNVNNL TDKRYVAACN SLEFCYFGAE RSVVGSVSYS F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle