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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50122743, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAARTGKLK RQEDQASFVS WRFALLCGCI LFAMAGLMAR AAYLQVINPD KLVREGDMRS  60
   61 LRVQEVPTAR GMISDRAGRP LAVSVPVNAV WADPKEVNER GGITLDTRWK ALSDALDIPL 120
  121 DQLSTKINAN PKGRFVYLAR QVNPAIGEYI HKLKLPGINL RQESRRYYPS GQVTSHLIGF 180
  181 TNIDGQGIEG VEKSFDRWLT GQPGERTVRK DRFGRVIEDI SSVDSQAAHN LALSIDERLQ 240
  241 ALVYRELNNA VAFNKAESGT AVLVDVNTGE VLAMANSPSY NPNNLSGTPQ DIMRNRAITD 300
  301 IFEPGSTVKP MVVMTALQRG VVKENSVLST LPYYVNGHEI KDVARYSELT LTGVLQKSSN 360
  361 VGVSKLALAM PSSALVDTYA RFGLGKATNL GLVGESSGLY PQKQRWSDIE RATFSFGYGL 420
  421 MVTPLQLARV YATIGSFGIY RPLSITRVDP PVPGERVFSE ALVRSVVHMM ESVALPGGGG 480
  481 TKAAIKGYRI AIKTGTAKKV GPDGKYINKY IAYTAGVAPA SNPRFALVVV INDPQAGKYY 540
  541 GGAVSAPIFG AIMGGVLRTM NIEPDALPTG DKNEFVINRE EGSRGRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle