YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49613244, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLNMKKTFA AGALLALSCS MPALADDNKA EYLSDWWHQS INVVGSAHTR FGPQLSSTTY  60
   61 LEYEAFARKD WFDFYGYADV PKFFGGDPDS RGIWDKGSPL FVEIEPRFSI DKLTGADLSF 120
  121 GPFKEWYIAN NVIYDQGRNS GSRQSTWYMG LGTDIDTGTD LSLSLNGYAK YQWQNYGAAN 180
  181 ENEWDGYRVK VKYSYPLGSL MGGNVSYISF TNFDFGSELR DKSNSSRTNN SIASSHILAL 240
  241 GYDHWHYSFV ARYFHNGGQW ADGAELNFGK GPFEVKSTGW GYYLVVGYNF

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	290	0.99