YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49613067, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPILNALLAF ASYFFIGFAM VLAFLFIYTR VTPHDEWALI KENNGTAAIG FGGALIGYVI  60
   61 PLSSAAINSV SLVDYITWGV VALVVQLLIY FAVRLYMPRL SQHIQNNDIA SGAFLCAASL 120
  121 SGGILNAACM SY

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.81
Transmembrane Helix	7	29	0.91
Cytoplasmic	30	44	0.77
Transmembrane Helix	45	67	0.88
Non-Cytoplasmic	68	74	0.72
Transmembrane Helix	75	97	0.89
Cytoplasmic	98	108	0.77
Transmembrane Helix	109	130	0.86
Non-Cytoplasmic	131	132	0.75