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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49612489, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRIIMLIPT GTSVGLTSVS LGVIRSMEQK GVRLSVFKPI AQPRSGDNTP DQTTTIIRAN  60
   61 SAINAAEPLA MSRVEALLSS NQQDVLMEEI IARYHENTKD AEVVLVEGLV PTRKHQFANA 120
  121 LNYEIAKTLN AEIVFVLALG NDSPAQLKDR IELARSSFGG SKNKNITGVI INKLNAPVDD 180
  181 QGRTRPDLSE IFDDSTKASV ANIDPKQLFA NSPLPVLGCI PWSFDLIATR AIDMAKHLNA 240
  241 RIVNEGDIQT RRVKSVTFCA RSIPHMLEHF RPGSLLVTSA DRPDVLVAAC LAAMNGVEIG 300
  301 ALLLTGGYEM DPSIAKLCER AFQTGLPVFM VDTNTWQTSL SLQSFNLEVP ADDRQRVEKV 360
  361 QEYVARHIDT QWIDSLSAES ERSRRLSPPA FRYQLTELAR KAGKRIVLPE GDEPRTVKAA 420
  421 SICAERGIAH CVLIGNPEEI QRVAAAQGVE LGKGIEIVDP IVVRERYVAR LVELRKSKGM 480
  481 TEVVAREQLE DNVVLGTLML EQGEVDGLVS GAVHTTANTI RPPLQLIKTS PGSSLVSSVF 540
  541 FMLLPEQVLV YGDCAINPDP TAEQLAEIAI QSADSATAFG IDPRVAMISY STGNSGAGSD 600
  601 VEKVREATRL AQEKRPDLVI DGPLQYDAAI MADVAQSKAP NSPVAGKATV FIFPDLNTGN 660
  661 TTYKAVQRSA DLISIGPMLQ GMRKPVNDLS RGALVDDIVY TVALTAIQAT QL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle