YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Y2828_ERWCT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNTFIVCWQ YLRAFALIYL CLLAGNAVSA LLPFTIPGSI IGMLVLFTLL ASQILPAQWV  60
   61 KPGCYLLIRH MALLFVPIGV GVMNYYDLVN QQFGPIVVSC LISTFIVMLV VGFSTQIMQR 120
  121 ERATAGDRTP PKDNE

Type	Start	End	Confidence
Cytoplasmic	1	8	0.95
Transmembrane Helix	9	30	0.88
Non-Cytoplasmic	31	35	0.63
Transmembrane Helix	36	57	0.87
Cytoplasmic	58	65	0.84
Transmembrane Helix	66	86	0.93
Non-Cytoplasmic	87	92	0.85
Transmembrane Helix	93	115	0.91
Cytoplasmic	116	135	0.96