YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50121692, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLLKASLA ALTLMMSVSS YAAEKELIVA TDTAFVPFEF KQGDKYVGFD IDLWDAIAKQ  60
   61 LNLKYTLKPM DFGGIIPALQ TRNIDLALAG ITITEERKKA IDFSDGYYDS GLLVMVKADN 120
  121 NDIKGEQDLA GKVVAVKSGT GSVDYAKANI KTKDLRQFPN IDNAYMELGT NRADAVLHDT 180
  181 PNILYFIKTA GNGQFKAVGD SIKAQQYGIA FPKGSNELRE KVNGALKTLR ENGTYAEIYK 240
  241 KWFGVEPK

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	248	0.99