YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49611645, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITLYPATIY LHLATVGISI SLFVIRFFWL CRQSALLQQR WVKILPHIND TLLLISGIGL  60
   61 IILSHTYPFT PEQSWLTEKL FGVIIYILLG AIALGKRPRS QKVRWLAFVS ALLCFGVVVL 120
  121 LALTQSPLLM E

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.96
Transmembrane Helix	8	30	0.94
Cytoplasmic	31	47	0.92
Transmembrane Helix	48	69	0.88
Non-Cytoplasmic	70	74	0.94
Transmembrane Helix	75	95	0.92
Cytoplasmic	96	104	0.86
Transmembrane Helix	105	124	0.96
Non-Cytoplasmic	125	131	0.78