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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49611303, gi|...
Protein type: Transmembrane
Type Confidence: 0.49
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKFSILIAG GGSTFTPGIV LMLLQNQDRF PIGTLKFYDN DSARQEIVAE ACKILLQEQA  60
   61 PEIKFSYTTD PQTAFTDVDF VMAHIRVGKY PMRELDEKIP LRHGVVGQET CGPGGIAYGM 120
  121 RSIGGVLELV DYMEQYSPQA WMLNYSNPAA IVAEATRKLR PNAKILNICD MPIGIEGRMA 180
  181 DILGLKSRKE MTVRYYGLNH FGWWTSIQDK DGNELLPAIR EHVAQHGYIP LTVENHNEAS 240
  241 WNDTFAKAKD VCALDPQTLP NTYLKYYFFP DYVVAHANPD YTRANEVMAG REKQVFGACR 300
  301 AITEAKSGAA GDLEIDEHAS YIVDLARAIA FNTRERMLLI VENNGAIRNF DPSAMVEIPC 360
  361 LVGSHGPEPL QIGDIPTFQK GLMSQQVAVE KLVVEAWEEG SYQKLWQALT LSKTVPSASV 420
  421 AKAILDDLID ANRDFWPELH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle