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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49611157, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLASLLRL PSNMKGSQWQ ILAGPILILL ILSMMVLPLP PFILDLLFTF NIALSIMVLL  60
   61 VAMFTQRTLE FAAFPTILLF STLLRLSLNV ASTRIILLDG HTGTAAAGKV VEAFGHFLVG 120
  121 GNFAIGIVVF IILVLINFMV ITKGAGRIAE VGARFVLDGM PGKQMAIDAD LNAGIIGEEE 180
  181 AKKRRTEVTQ ESDFYGSMDG ASKFVRGDAV AGLIIMVINI VGGLIVGVVQ HGMPVGQAAE 240
  241 SYTLLTIGDG LVAQIPALII STAAGVIVTR VSTDQDVGQQ MVTQLFNNPR VMVLSAAVIG 300
  301 LIGLVPGMPN FVFLLFTASL LGLAWWIRGE QTKEPAMQPI PASMEKHQVI EASWSDVQLE 360
  361 DPLGMEVGYR LIPMVDAQQD GELLGRIRSI RKKFAQEMGY LPPVVHIRDN LELQPASYRI 420
  421 LMKGVEVGSG EAHPGRWMAI NPGNAVGSLS GDITQDPAFG LPAVWIDNAL KDQAQAQGFT 480
  481 VVEASTVVAT HLNHLIALHA SELFGRQEAQ QLMERVAQEM PKLTEDFIPG VVTLTTLHKV 540
  541 LQNLLSERVS IRDMRTIMET LAEHAPVQPD PYELTTVVRV ALGRAITQQW FPGDSELQVI 600
  601 GLEGSLERLL LQALQGGGGL EPGLADRLLE QAKQALQRQE MLGAPPVLLV NHALRALLAR 660
  661 FLHRSLPNMA VLSNLEISDH RQIRMTSVIG EAQK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle