YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49610691, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRRNFLKLA TGGVMTVGIA PSALAKAENK PPIPNSLGML YDSTLCVGCQ ACVSQCQRIN  60
   61 HSDAPHGATY AYAGTEPMWS NNDKLSPYTN NIIQVWSDGS GVHKDQTENG YAYIKKQCMH 120
  121 CVDPNCVSVC PVQALRKDAH TGIVHYDPDV CTGCRYCIVG CPFNVPKYDY DDPFGKIHKC 180
  181 ELCNQKGVER LDNGGLPGCV EVCPTGAVIF GTREQLLDEA KMRLAGKTGE PYRFPRQTLQ 240
  241 GNDRYEHPLP HYQQHVYGEL EGGGTQVLVL TGVPFENLGL PLLDSLSTGA RSEHVQHSLY 300
  301 KGMVLPFAAL AGITFLVQRN MGKHDQDEKE DEHDDA

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	336	0.96