YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49610595, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKAKGAEVA KRRLRLSNVW HLLATGFGSG LSPWMPGTVG SLAAIPLWYL MSFLPLELYS  60
   61 LLVMLSICIG VYLCHQTAKD MGVHDHGSIV WDEFVGMWIT LMAIPVDSWQ WVAAGFIVFR 120
  121 CLDIWKPWPI RWFDRNVHGG MGIMIDDIVA GVISAGIIYF IGHHWPIF

Type	Start	End	Confidence
Cytoplasmic	1	18	0.90
Transmembrane Helix	19	38	0.90
Non-Cytoplasmic	39	54	0.66
Transmembrane Helix	55	75	0.87
Cytoplasmic	76	88	0.75
Transmembrane Helix	89	119	0.68
Non-Cytoplasmic	120	141	0.53
Transmembrane Helix	142	163	0.90
Cytoplasmic	164	168	0.47