YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CYSZ_ERWCT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEKSSFPE KPPSFEKPSH SNTADHTRSG VHYFFAGWRL ISLPGIRRFV ILPLLMNIVL  60
   61 MGGAFWWLFT QLNDWIPQIM SHIPSWLQWL SYLIWPLAVL SILLVFSYLF STIANFIAAP 120
  121 FNGLLAEQLE AKLTGQTLPD SGILSIAKDV PRIMKREVQK LAYYLPRAIV LLLLYFIPGI 180
  181 GQTVAPVLWF LFSAWMLAIQ YCDYPFDNHK VGFSTMRQAL RRHKVANMQF GALVSLFTLV 240
  241 PFLNLVIMPV AVCGATQLWV DRYRNLSATL PKKSP

Type	Start	End	Confidence
Cytoplasmic	1	48	0.97
Transmembrane Helix	49	69	0.96
Non-Cytoplasmic	70	91	0.89
Transmembrane Helix	92	112	0.92
Cytoplasmic	113	162	0.94
Transmembrane Helix	163	191	0.78
Non-Cytoplasmic	192	235	0.65
Transmembrane Helix	236	260	0.79
Cytoplasmic	261	275	0.69