YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49609831, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSILRFFVV VIFSILICIF GLFYCLFSPR NPRHVATFGR LFGRLSVVFG LKVEMRIPEE  60
   61 AAHYGNCIYI ANHQNNYDMV TVSSAVQPRT VTVGKKSLLW IPFFGPLYWL TGNLLIDREN 120
  121 RAKAHGTIAQ VVKHIKERNT SIWMFPEGTR SRGRGLMPFK TGAFHAAISA EVPIVPICVS 180
  181 TTSNKVKLNR WNNGIVIVEM LPPIDTRVYT KDQVRELATH CHDVMAAKIA ELDAEVAARE 240
  241 AANKK

Type	Start	End	Confidence
Cytoplasmic	1	6	0.65
Transmembrane Helix	7	27	0.94
Non-Cytoplasmic	28	245	0.64