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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50119274, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQIRLLAQY YVDLMVKLGL VRFSLLLASV LVLLAMVVQM AVTLLLSGEV ENIDVVRSIF  60
   61 FGLLITPWAV YFLSVVVEQL EESRQRLSKL VAKLEEMRHR DLELNVQLQE NIAQLNQEIA 120
  121 DRIKAEEARV LVMSRLKEEM SRREQAQIEL EQQSALLRSF LDASPDLVYY RNEEKEFSGC 180
  181 NRAMELLVGK SQKQLIGLTP QDVYAPDIAE KVMETDEKVF RHNVSLTYEQ WLVYPDGRKA 240
  241 CFELRKVPFY DRMGKRHGLM GFGRDITERK RYQDALENAS RDKTTFISTI SHELRTPLNG 300
  301 IVGLSRILLD TQLDLEQQKY LKTIHVSAIT LGNIFNDVIE MDKQERRKVQ LDNQPIDFTG 360
  361 FLVDLENLGG LLAEQKGLKL IMDQHQPLPQ KVITDGTRLR QILWNLLSNA VKFTPKGEKG 420
  421 EKGEIVVRVW HEKGDRLRFE VEDSGMGIPA DELEKIFAMY YQVKDQHGGK PATGSGIGLA 480
  481 VSKRLAQNMG GDIHVSSSQG KGSCFTLTVI APSADEAGSG LEDDDDLPLP ALHVLLVEDI 540
  541 ELNVVVARSV LEKLGNSVDV AMTGQEALDM FDPDEFDLVL LDIQLPDMTG LDVARQLRSR 600
  601 YGKRSLPPLV ALTANVLKDK REYLDAGMDD VLSKPLSVPA LTAVIKQHWD THTVWTEESV 660
  661 VEEGDEMAKV KEDLLDIPML EQYLDLVGPK LIHQSLEMFE QMMPGYLAIL DSNMTARDQK 720
  721 GITEEGHKIK GAAGSVGLRH LQQIAQQIQT SSLPAWWDNV QEWIDELKHD WRHDVQVLRD 780
  781 WVAKAEKES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle