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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49609574, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSPDIKIKV QNFGRFLSNM VMPNIGAFIA WGIITALFIP TGWIPNETLA KLVGPMITFL  60
   61 LPLLIGYTGG RLVFGERGGV VGAITTMGVI VGTDIPMFLG AMIVGPLGGW TIKRFDRMVD 120
  121 GKIKSGFEML VNNFSAGIIG MLLAILSFLA IGPLVEVFSQ VLASGVNLMV QNNLLPLTSI 180
  181 FVEPAKILFL NNAINHGIFS PLGIQQATET GKSIFFLIEA NPGPGMGVLM AYMFFGRGNA 240
  241 KESAPGAAII HFLGGIHEIY FPYVLMNPRL IIAVILGGMT GVFTLSVLGG GLVSPASPGS 300
  301 ILAVLAMTPK GAYFANLAAI AAAFAVSFIV SAILLKSTKQ KEEDLGDATR RVQEMKASSK 360
  361 GAATGAGVSG DMSTVRKIIV ACDAGMGSSA MGAGVLRKKV QDAGLTNISV TNSAINSLPD 420
  421 DVDLVITHRD LTERAMRHAP QAQHISLTNF LDSGLYSDLA ARLVAAQGAA KHETVATPAP 480
  481 AVADVQTNLF QLGAGNVFLN QHATHKEQAI RFAGEQLVKG GYVEPEYVEA MLEREKLTST 540
  541 YLGESIAVPH GTIEAKDRVL KTGVVFCQYP EGVRFGDEED EVARLVIGIA ARNNEHIQVI 600
  601 TSLTNALDDD AVIERLAHTQ DVQEVLDLLS GKKSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle