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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85105158
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADPLSFYLE DDKTQPGTRS NFNVDYVIHY KLPTTSGLSA PGMASLAASD DTNIRPVKEK  60
   61 EEAEAAFIQL INALSAVGFA TEVRPGGKSS LLVFTKIASE KLLTSQVYRY RIQDWLFGVR 120
  121 TSAPNQDLSK YLEEEPVSEA ERLRLTYLLI TKSKNEGGAG ITAKVGKWKY VDSIFPLHDH 180
  181 DFNRRWIKAW SSKYFLDEED LNRIRDKFGE RVAFYFAFLQ SYFAFLLFPA AFGFAAWLIL 240
  241 GKFSWFYAVV NALWSVVFFE HWKTKEVDLA VRWGVRGVSR IQHPRPQFQF EREAQDPVTG 300
  301 EIVRVYSPFK RLARQLLQIP FALACVVVLG GLIVSCFSIE VFITEIYTGP FKQYLTFLPT 360
  361 VLLTIFMPTF SGLLTNLAEK LTKAENYETH DAHQASFIEK IFVLNFITSY LPIFLTAFVY 420
  421 VPFGKLLVPY LDVFKVTAQS FTTMEKPVTK SWEINPDRLT TQVIYFTVTA QIVNFLTEVI 480
  481 VPYAKRKVFK KVQEVQSEFT GNGHELQIKD HPDEADFLKR VRNEAELDAY DVTVDYREMV 540
  541 VQFGYLSLFS VIWPLAACSF LVNNWVEARS DAMKIAIGSQ RPVPWRADSI GPWLNSLGFL 600
  601 SWLGSITSAA LVYLFNKHDI NPDGTPWDIS GWALLLSILF AEHIYFAVQL VVRSLVQKLD 660
  661 NPGLQKERAE RYALRKKLLE QTFGSHGYDA DLTEEARGPG YVSSGERITR EALEEEARVN 720
  721 ATKTPEQLFW LRQRGAAETI EIGRGLMAEV STNLSLTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle