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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85111234
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIVHDLKTG KQTWHSTRYR FTDSSANKPR RLRPGLIVMK FGEQLRSSII REYQWYYIDY  60
   61 DGLKADLKRP SGPHGEWTEE DEKRFVSKLE AELDKVHTKQ QVKAMEISRR IAVSEREVKD 120
  121 VVNRLQERGL NEEGPSEEEF MLLEEDLSDI IAEVHDLAKF VQVNYTGFYK IIKKHDKMTG 180
  181 WRLKPVFDAR LKAKPFYKEN YDAAVVKLSK LYDLVRTRGN PVKGDSSAGG SQGSFVRHTT 240
  241 KYWVHPDNVT ELKLIILKHL PVLVFNPSKE FEEADSAISS IYYDNPETFE LYEGRLKKTE 300
  301 GAEAIRLRWY GGMQTETIFV ERKTHREDWT GEKSVKARFA LKEKLVNPYL RGELLPSAIF 360
  361 EKARKEGKKS EKAIAEDERL AAEIQYSVLK KKLKPVVRSF YHRTAFQLPA DARVRISLDT 420
  421 ELTMIREDNL DGVQRSGDNW RRTDIGIDWP FPQLPPSDIC RFPYAVLEVK LQTQLGQEPP 480
  481 EWVRQLISSH LVEAVPKFSK FIHGTASLFP DRIHLLPYWF PQMDVDIRKP PTHDFGIKRL 540
  541 ESSTRTSTTD VDEDDDEDSD EENETTTENQ NGETSGQGVT RNRRARGGVT ATDIEDQTVD 600
  601 QASNENTYLY DSEDEPDEDR LEEARRVGGW TYYSTLLQTR ANAAARVTWS VLKALVPRPR 660
  661 ASQVPRNANL ESLLGSGEIH QKRIKAPKGK KIYVPVRVEP KVYFAAERTF LGWALRQATR 720
  721 TDNDIQQLEY SIYIGTIAVT LLNFGASDKG GRGSSIIAAG VFTLLAFLSL WYAVVIYLYR 780
  781 SHAIRTRKAA RYYDKWGPSI LCAALFVAVV LNFVYEGKGR GVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle