YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85106061
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.20
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHLARQALL LRRIRQNTTT TTLCKTGKRF QSSGKETKGD HDETKAEAKS STISPQQKSE  60
   61 QPQQPPNTET ASGSGSQPTP AHESIADSMS KYLHLPHLPH LPHRPTKEEL LAAASGFWSR 120
  121 LKVRFKWFSI RSMRPWNADE WGAFVSFFLF GHLVWILVGT TTFFSLIILF INTVFAQETL 180
  181 AKWIGDYLTQ SAGLTVVFES AIVPKWGDGV ITFRNVFVSR RPGQPKSSVK KGSSEAAAEA 240
  241 AAAKQAAEQE GTAVEEDDGN YTQFDVTIDT VNVALSFLKW WNGKGLLKDV EIKGVRGVVD 300
  301 RTSVVWGNED LNPLDFRQEH NPGDFELDHF KMEDLLVTVH QPGGFRPFSV SIFSCELPQL 360
  361 RKQWLFYDFL SANHMSGSFD GSLFTIHPRQ IHGVSAADNG RHHQDEFGSP SAWKKFSRLR 420
  421 IDGLKIDHLN RGVEGPFGWI YEGNVDMIAD IMFPADPEEG LSKVVAEFYD KMEEAVTSNR 480
  481 YLKILDGNIS PNSRSNTNSP TLESGPIPES ASDIDLTGHH DELPTSEQHF PPLIPPATPK 540
  541 EPAPIEETPS YLVMDLRIHL NDVRAAVPLF NNPHMSYVNQ ALVRPIVAYI NAKRTYIPIS 600
  601 CRIVKRLTDF DGAWTVWDCG LMDDMSAEVY RAFARNVEDQ QSRVRRFKRV GLWTVSLVVH 660
  661 ALLAGVAGDL M

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle