YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85107803
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQPTSAPSA PALTPQFCFS TAALRDFLRV SRSAIDDTIT QNLNALVTPS RAGFDPSSTT  60
   61 QRSPRPLSRQ IDPAACQEFK DQVLFPSWQA RSQVLSYCAL VATSPDPDDP EAAIREAEKQ 120
  121 KDRERVVNER LDPYSARFFP REPRTEQLAS VIRMEQGVEN IVRTRTWGIV GERCGSDGKT 180
  181 WEQALGEWRR DKHLPLA

Type	Start	End	Confidence
Signal Peptide	1	22	0.63
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	197	0.99