YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32414869, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSIVSTTT TLPTPAHSVN GSSLANDMSF TDIVMGENSP QKRKRTSDDV GDREQKKVHI  60
   61 EDRKLGIDDL HLDVGEKYLL CRSRKAPFTC TQKKQQQQQQ RRRRRQWHMR EKRSRSLWLM 120
  121 LPQRRALSLE HQPPRPHLSE DLFEMYGLAD LAAEYARIKD GQKNALRKTY KGHIKKLGVQ 180
  181 GHFDSVKTDE KDPERLEYLM GCPQEEWNAH FVRGKEITRG LSSDMKSKIS RAVTMSRGAV 240
  241 PSTLWNNSVL GDIAASSMKA HLNQPPSARP TAPNTPLAYG GPAMQRVKPQ TPGFQDNRPR 300
  301 RNIKKRGYGD SSFEGYGEGF EDDGGLETGY STGEGDMASG LKRRKKVLIG SNVPG

Type	Start	End	Confidence
Signal Peptide	1	18	0.84
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	355	0.99