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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32414661, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSPELSSA SNGGRTQTTK TTTTSQRNNP HYPTRTELVA LALYPTLLLF GTLFSLLNPS  60
   61 ARSSPYDFVS QSHVQSGDAI PSYFARKDNL FNVFFVKRAW FWITVSFFGF LFSHPGYNSN 120
  121 NNNNMTGTRG GDNGSGTGRK IKAVVRWGLV TLWWVFVTQW FFGPAIVDRG FRVTGGKCQE 180
  181 AQGRVNAQVK ADAMPGPVGS NVEVAGLKEF VTAAACKAAG GKWQGGHDIS GHVFLLVLGS 240
  241 AFLVQEVGWV VARHYWRRSV RDERTVVMGD GAVKSAGTDL AADKRWDDYS PEMDEAREVR 300
  301 DVVTGGGLWD ALGHGGKVVF VVVGLSAWML LMTAIYFHTW FEKLTGLLVA LMGFAHNTDT 360
  361 VMSPIKAPPN LPELVRTAFN KARASGDVNF YPTQVTLVDV NSIPFQLRFS PSLANKPKAP 420
  421 NPNPIIPSEN GLPAEPPRKK PVFDPFDNPS PAMLVCPLPP HHNLVLNKFA IVPEHFILCT 480
  481 KEYKEQTDLL EREDLEAVRG CIEVYHHHYQ QQYNGERRSD DGNETTEGGE EPKLFAFFNC 540
  541 GEHSGASQPH RHLQLLVVEK MREGLECVET EREMETIEEA KGKKKMRWEV LAQKLVDNKE 600
  601 TEGKLLPFKT FAERLTPEMS GEEVHQVYLE LYRRAREAVR LYHQLSLQQS RASRQPQQDS 660
  661 TTKGETAEGE EKADEIQTGG EATISYNLAM TRDVMVIVPR LAEGSAITGK NPETGEEVVV 720
  721 GKLALNGTVL AGTALVKSQR EWDALRRNPE KVGELLRVIG VPNDCEGERG EGRKDGRKGM 780
  781 L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle