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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28918255, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFGKTLKQS IYEPWRDKYI EYDKLKSLLR EDRPDDDEPW TEEDEVRFCD EIFNVQLEKV  60
   61 AQFQEEKMQE LRQRVDAAFD KLKDLPPADS ENKDKPTDEA LAQRLKELEA ELDAITNEVK 120
  121 ELRKYSNLNY TGFLKIVKKH DRKRGDRYKI RPIMQVSLSK RPFNSEQGYT PLLNKLSLLY 180
  181 FAIRQHLEEN GSVEPYHLDP ISQPETHNGE KYTAYKFWVH PDNLLEVKTY ILRRLPALVY 240
  241 SHQSSKEWDG DEDPTITSLY FDNANFQLYY QKVEREAEAS SLRLRWYGQL SQNPEIVFEQ 300
  301 KIIHDNGTSE ERKFPIKEKY IKPFLDGEYK MEKSIQKMER QGQSPADVEE FRSTAEAIQD 360
  361 YIRSNKLEPV VRANYVRTAF QNPGDDRIRL SIDTDIAFIR EDTLDRDRPC RDPNNWHRTD 420
  421 IDDSNMTYPF KNINQSEVSL FPYAVLEIKL KEDQNRKRPV WVTDLMASHL VHPCPRFSKF 480
  481 MQGVASLFED YVNRLPFWLP DLDTDIRKDP QVAFEEEEVK RAHRAQNEQV VGSFLGTKLG 540
  541 NSFKPSRSSP VAKSYLAERV AAESSGAKAQ TPASGATDRT PTAVTPAGEL NESSSSQQQD 600
  601 GGQQQGGRSE YGTMTLSSVF PGFSLSKYSK AMRLKRAQGE GGRRGSVTLP PGVEEPTEWL 660
  661 KNSGPLQIEP KVWLANERTF LKWQHICVLL GGLAISLYTA AGRGTVAEWI AVGFIIIAAF 720
  721 AGGWGYFLLH SRRKMIIERS GKDFDNFFGP LVISVALMVA LILNFSFAYR DFLARAQARA 780
  781 AIEALFIQSS NSSASHIDLR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle