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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16944435, gi|...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALKNAPAP AVTVRSSKAL GLKTCNPIPP SLPSPKDAAE AASPTSPTLS HTASDDSTIA  60
   61 DMPPGGRPRH NPPKREADFS TLLSPQEKND LTSLITRTTD VMQKHFSHVY DSAGLVDDAP 120
  121 SVRNKFWSGL PAHLRDFSIT KPLPAETQLL NPKKRTKGKT SRSQKENGNM ARDTKNSSGA 180
  181 ALQPANPSNL NIQRAPEQDN DKTIGPYLQE LKKEAMLHFK KWQTAVHKRM GDISVKRAGD 240
  241 ANFNSTVPNS RRGRNRPNGV STSNIESDPV LMQLYPPIPS TLCYWPLERR LLVLHALLLL 300
  301 LLSLEHYSAY TRVLLLHITS SLNLPLRVLV DDEVRVAKAI AWMAKDINPE ELIQKRIEEC 360
  361 AGKPSRRWRH GLASMAGISS FGIPGHLAPP LVAAGIGSVN GGFGLGPTAS AGILGSTGES 420
  421 AFVVGALLGI YNARTSVKLM EQCTKEIQDF AFIPMRGSIG QDGEIGKIQP DARRLRVVLA 480
  481 ISGWLTDESD VTNPWRALGQ ANEVYAVRWE VDSLSKMGTA LETVVRSSAW SMAKKEIIAR 540
  541 TSEPPFNIPK CNLSRRANKH GPVFTSMTES LWPLGLLKIN KIIDNPWSVG MVRADKAGTL 600
  601 LADAIMNKAH GERGVTLIGY SLGARAIYVC LMVLAERRAF GLVENAVMMG TPAPSEARVW 660
  661 CTMRSVVSGR LVNVFSENDY LLGFLYRTSS IQFGVAGLQR IEGIDGVENV DVSAKVSGHL 720
  721 RYQYLAGSIL KHINWEDINQ EQVSRDEAAM VAAEERVRER EKKRDAVERG IVVIDKAKEA 780
  781 AKNDPGIIRT RMRKKNKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle